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Volume 30, Number 1—January 2024
Research

Disease-Associated Streptococcus pneumoniae Genetic Variation

Shimin Yang1, Jianyu Chen1, Jinjian Fu1, Jiayin Huang, Ting Li, Zhenjiang Yao, and Xiaohua YeComments to Author 
Author affiliations: Guangdong Pharmaceutical University, Guangzhou, China (S. Yang, J. Chen, J. Huang, T. Li, Z. Yao, X. Ye); Liuzhou Maternity and Child Health Care Hospital, Liuzhou, China (J. Fu)

Main Article

Figure 3

Preliminary screening for infection-associated k-mers by linear mixed model in study of disease-associated Streptococcus pneumoniae genetic variation. A) Manhattan plot showing statistical significance and chromosomal location of k-mers mapped to a complete reference genome (TIGR4; GenBank accession no. NC_003028.3). B) Importance of the top 100 k-mer predictors in a simpler model with 886 k-mers. C) Gene ontology annotations of the top 100 k-mer predictors. OR, odds ratio.

Figure 3. Preliminary screening for infection-associated k-mers by linear mixed model in study of disease-associated Streptococcus pneumoniae genetic variation. A) Manhattan plot showing statistical significance and chromosomal location of k-mers mapped to a complete reference genome (TIGR4; GenBank accession no. NC_003028.3). B) Importance of the top 100 k-mer predictors in a simpler model with 886 k-mers. C) Gene ontology annotations of the top 100 k-mer predictors. OR, odds ratio.

Main Article

1These authors contributed equally to this article.

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Page updated: December 20, 2023
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